#!/usr/bin/env Rscript library(sqldf) library(plyr) library(plot3D) library(ggplot2) library(gtools) args = commandArgs(trailingOnly=TRUE) #print(args) #if (2 != length(args)) { #print("Requires 2 parameters)") #q() #} #file_db = args[1] #folder_out = args[2] file_db = 'results_benchtool.db' folder_out = 'plot_coll_chunked' print(file_db) make_facet_label <- function(variable, value){ return(paste0(value, " KiB")) } #connection = dbConnect(SQLite(), dbname='results.ddnime.db') print(file_db) connection = dbConnect(SQLite(), dbname=file_db) #dbdata = dbGetQuery(connection,'select mnt, siox, avg(duration) as ad, app, procs, blocksize from p group by mnt, siox, procs, blocksize, app') #dbdata = dbGetQuery(connection,'select * from p where tag=="mpio-individual"') #dbdata = dbGetQuery(connection,'select *, (x*y*z) as blocksize from p where count=8') #dbdata = dbGetQuery(connection,'select * from p where count<5') dbdata = dbGetQuery(connection,'select * from p where nn==10 and ppn=8') dbdata[,"blocksize"] = dbdata$x * dbdata$y * dbdata$z * 4 summary(dbdata) nn_lab <- sprintf(fmt="NN %d", unique(dbdata$nn)) names(nn_lab) <- unique(dbdata$nn) ppn_lab <- sprintf(fmt="PPN %d", unique(dbdata$ppn)) names(ppn_lab) <- unique(dbdata$ppn) breaks <- c(unique(dbdata$blocksize)) fig_w = 4 fig_h = 4 w = c(4, 6, 4) h = c(4, 4, 4) event = c("paper", "isc-pres", "poster") dims_list = data.frame(h, w, event) # df is a data frame for (scale in c('log', 'linear')) { fss = unique(dbdata$fs) for (fs in fss) { data1 = dbdata[fs == dbdata$fs, ] # ime, lustre, fuse ifaces = unique(data1$iface) for (iface in ifaces) { data2 = data1[iface == data1$iface, ] # posix, mpio, ime apps = unique(data2$app) for (app in apps) { data3 = data2[app == data2$app, ] # ior, benchtool filleds = unique(data3$filled) for (filled in filleds) { data4 = data3[filled == data2$filled, ] unlimiteds = unique(data4$unlimited) for (unlimited in unlimiteds) { data = data4[unlimited == data3$unlimited, ] dat_write <- data.frame(chunked=data$chunked, type=data$type, perf=data$write, blocksize=data$blocksize, access="write") dat_read <- data.frame(chunked=data$chunked, type=data$type, perf=data$read, blocksize=data$blocksize, access="read") dat <- rbind(dat_write, dat_read) #dat$lab <- paste0(dat$blocksize/1024, "/", dat$access) dat$lab <- paste0(dat$blocksize/1024) dat$lab_type <- data$type; dat$lab_type[dat$lab_type == "coll"] = "Collective" dat$lab_type[dat$lab_type == "ind"] = "Independent" dat$lab_chunked <- data$chunked; dat$lab_chunked[dat$lab_chunked == "auto"] = "Chunking" dat$lab_chunked[dat$lab_chunked == "notset"] = "No chunking" print(summary(dat)) print(mixedsort(unique(dat$lab))) p <- ggplot(data=dat, aes(x=lab, y=perf, colour=as.factor(blocksize/1024), group=interaction(access, blocksize)), ymin=0) + #ggtitle("Write") + #facet_grid(ppn ~ ., labeller = labeller(nn = as_labeller(nn_lab), ppn = as_labeller(ppn_lab))) + facet_grid(. ~ lab_type + lab_chunked + access) + xlab("Blocksizes in KiB / Access") + ylab("Performance in MiB/s") + theme(axis.text.x=element_text(angle=90, hjust=0.95, vjust=0.5)) + theme(legend.position="bottom") + #ylim(0, 100000) + #scale_x_continuous(breaks = c(unique(data$nn))) + #scale_color_manual(name="Blocksize in KiB: ", values=c('#999999','#E69F00', '#56B4E9', '#000000'), breaks=sort(unique(data$blocksize)/1024)) + scale_color_manual(name="Blocksize in KiB: ", values=c('#999999','#E69F00', '#56B4E9', '#000000', '#999999','#E69F00', '#56B4E9', '#000000'), breaks=mixedsort(unique(dat$lab))) + scale_fill_manual(name="Blocksize in KiB: ", values=c('#999999','#E69F00', '#56B4E9', '#000000', '#999999','#E69F00', '#56B4E9', '#000000'), breaks=mixedsort(unique(dat$lab))) + #stat_summary(fun.y="median", geom="line", aes(group=factor(blocksize))) + #stat_summary(fun.y="max", geom="line", aes(group=factor(blocksize))) + geom_boxplot() #geom_bar() #geom_point() if ('log' == scale) { p = p + scale_y_log10(breaks=c(100, 1000, 10000, 40000)) } { p = p + scale_x_discrete(breaks=mixedsort(unique(dat$lab)), limits=mixedsort(unique(dat$lab))) } filename_eps = sprintf("%s/performance_%s_FS:%s_IFACE:%s_FILLED_%s_LIM:%s_SCALE:%s.eps", folder_out, app, fs, iface, filled, unlimited, scale) filename_png = sprintf("%s/performance_%s_FS:%s_IFACE:%s_FILLED_%s_LIM:%s_SCALE:%s.png", folder_out, app, fs, iface, filled, unlimited, scale) ggsave(filename_eps, width = 8, height = 8) ggsave(filename_png, width = 8, height = 8) system(sprintf("epstopdf %s", filename_eps)) system(sprintf("rm %s", filename_eps)) }}}}}} #}}