#!/bin/bash

# call me from the parent directory

echo "This script performs the complete analysis steps"

CLEAN=0 # Set to 0 to make some update

function prepare(){
  pushd datasets
  ./decompress.sh
  popd

  for I in datasets/*.csv ; do
		if [ ! -e $(basename $I) ]; then
			echo "Creating symlink $(basename $I)"
			ln -s $I
		fi
  done
}

prepare

for I in job_similarities_*.csv ; do
  rm *.png *.pdf
  ./scripts/plot.R $I > description.txt
  OUT=${I%%.csv}-out
  mkdir $OUT
  if [[ $CLEAN != "0" ]] ; then
    rm $OUT/*
    mv description.txt $OUT
  fi
  mv *.png *.pdf jobs-*.txt $OUT
done

# analyze peformance data

for I in datasets/progress_*.csv ; do
  OUT=fig/$(basename ${I%%.csv}-out)
  ./scripts/plot-performance.R $I $OUT
done