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8 Commits

Author SHA1 Message Date
JT Acquaviva 9cbb2d6330 Fix an early exit in the code 2019-08-25 22:48:17 +02:00
JT Acquaviva fdf70a0e1d Add support to user lib in Makefile 2019-08-25 22:47:50 +02:00
JT Acquaviva 9d46cd6d83 Merge branch 'master' of http://git.hps.vi4io.org/julian.kunkel/server-side-compute 2019-08-25 22:36:54 +02:00
JT Acquaviva 7312936310 Reduce the size of the data file for testing purpose 2019-08-25 22:36:33 +02:00
JT Acquaviva 136cccb67d Add call to the 'transaction' based NGI 2019-08-25 22:35:49 +02:00
JT Acquaviva db7e403a10 add a data parser to dump content of the file 2019-08-25 22:35:07 +02:00
JT Acquaviva fed97e48bc Add notion of transactions + loging to NGI 2019-08-25 22:33:51 +02:00
JT Acquaviva 79e601775e Adding Makefile 2019-08-25 22:32:56 +02:00
7 changed files with 234 additions and 4 deletions

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@ -1,4 +1,5 @@
#include <ngi.h>
#include <ngi_log.h>
#include <assert.h>
#include <float.h>
#include <math.h>
@ -23,6 +24,98 @@ int server_reduce(FILE * file, ngi_op_t op, ngi_type_t type, void * out_buff, si
return 0;
}
/*
* this function should be called by IME client on the compute node
*/
int ngi_client_side_reduce(FILE * file, ngi_op_t op, ngi_type_t type, void * out_buff, size_t off, size_t size){
ngi_dbg("Starting offset %lu size %lu Byte\n",off, size);
assert(size <= NGI_EXT_SZ);
fseek(file, off, SEEK_SET);
assert(type == NGI_TYPE_FLOAT);
assert(op == NGI_OP_MAX);
int res = ngi_server_side_reduce(file, op, type, out_buff, off, size);
assert(res == 0);
return res;
}
/*
* this function should be called by IME server on the storage appliance
*/
int ngi_server_side_reduce(FILE * file, ngi_op_t op, ngi_type_t type, void * out_buff, size_t off, size_t ext_sz){
ngi_dbg("Starting offset %lu size %lu Byte\n",off, ext_sz);
assert(type == NGI_TYPE_FLOAT);
assert(op == NGI_OP_MAX);
assert(ext_sz <= NGI_EXT_SZ);
float * data = malloc(ext_sz);
fseek(file, off, 0);
fread(data, ext_sz, 1, file);
float mx = -INFINITY;
for(size_t i=0; i < ext_sz/sizeof(float); i++){
mx = data[i] > mx ? data[i]: mx;
}
ngi_dbg("Result: %f \n", mx);
*(float*) out_buff = mx;
free(data);
return 0;
}
/*
* this function split the reduction in a set of client server transaction
*/
int ngi_reduce_stub(FILE * file, ngi_op_t op, ngi_type_t type, void * out_buff, size_t off, size_t size){
fseek(file, off, SEEK_SET);
assert(type == NGI_TYPE_FLOAT);
assert(op == NGI_OP_MAX);
u_int32_t nb_tx = size / NGI_EXT_SZ;
// handle remainder in extend computation
if (size % NGI_EXT_SZ != 0)
nb_tx += 1;
float *tmp_red = (float*) malloc(sizeof(float*) * nb_tx);
/* will be executed in parallel withint the client */
ngi_dbg("Reduction from %lu to %lu Byte in %u transactions\n", off, size, nb_tx);
for(u_int32_t i = 0; i < nb_tx ; i++){
size_t ext_off = off + NGI_EXT_SZ * i;
int res = ngi_client_side_reduce(file, op, type, &tmp_red[i], ext_off, NGI_EXT_SZ);
assert(res == 0);
}
float mx = -INFINITY;
for(u_int32_t i = 0; i < nb_tx ; i++){
mx = tmp_red[i] > mx ? tmp_red[i]: mx;
}
*(float*) out_buff = mx;
free(tmp_red);
return 0;
}
int ngi_reduce(FILE * file, ngi_op_t op, ngi_type_t type, void * out_buff, size_t off, size_t size){
fseek(file, off, SEEK_SET);
assert(type == NGI_TYPE_FLOAT);
assert(op == NGI_OP_MAX);
float * data = malloc(size);
fread(data, size, 1, file);
float mx = -INFINITY;
for(size_t i=0; i < size/sizeof(float); i++){
mx = data[i] > mx ? data[i]: mx;
}
*(float*) out_buff = mx;
free(data);
return 0;
}
int server_reduce_any_func(FILE * file, void (*func)(int8_t * data, void * out_buff, size_t off, size_t size), void * out_buff, size_t max_out_data_size, size_t off, size_t size){
fseek(file, off, SEEK_SET);

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@ -3,6 +3,12 @@
#include <stdlib.h>
#include <stdio.h>
//#include "ngi_log.h"
/*
* Define the size in B of file extent exchanged between server and clint
*/
#define NGI_EXT_SZ 1048576
typedef enum NGI_OP{
NGI_OP_MAX
@ -12,6 +18,12 @@ typedef enum NGI_TYPE{
NGI_TYPE_FLOAT
} ngi_type_t;
/*
*
*/
int ngi_server_side_reduce(FILE * , ngi_op_t , ngi_type_t , void * , size_t , size_t );
int ngi_client_side_reduce(FILE * , ngi_op_t , ngi_type_t , void * , size_t , size_t );
int ngi_reduce_stub(FILE * , ngi_op_t , ngi_type_t , void * , size_t , size_t );
/*
* This function invoces a well known reduction operation on data of a well known type
* Return 0 upon success, any other code, if e.g., short read

42
emulation/ngi_log.h Normal file
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@ -0,0 +1,42 @@
/******************************************************************************
*
* NGI log utilities
*
******************************************************************************/
#ifndef COMMON_NGI_LOG_H
#define COMMON_NGI_LOG_H
#include <stdlib.h>
#include <stdio.h>
enum ngi_log_level
{
NGI_LOG_DBG,
NGI_LOG_WARN,
NGI_LOG_ERROR,
NGI_LOG_MAX
};
enum ngi_log_level NGI_Log_Level = NGI_LOG_DBG;
/*
#define ngi_log(lvl, fmt, ...) \
do { if (lvl >= NGI_Log_Level) fprintf(stderr, "%s:%d:%s(): %s" fmt,\
__func__, __VA_ARGS__); } while (0)
*/
#define ngi_log(lvl, fmt, ...) \
do { if (lvl >= NGI_Log_Level ) fprintf(stderr, "== ngi_log == %s: " fmt, __func__, ## __VA_ARGS__);}\
while (0)
#define ngi_dbg(msg, ...) ngi_log(NGI_LOG_DBG, msg, ##__VA_ARGS__)
#define ngi_warn(msg, ...) ngi_log(NGI_LOG_WARN, msg, ##__VA_ARGS__)
#define ngi_error(msg, ...) ngi_log(NGI_LOG_ERROR, msg, ##__VA_ARGS__)
/* getter and setters */
#define ngi_log_level_set(ngi_log_level) NGI_Log_Level = ngi_log_level;
#define ngi_log_level_get(ngi_log_level) ngi_log_level;
#endif

43
test/Makefile Executable file
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@ -0,0 +1,43 @@
ROOT=../../server-side-compute
CC=gcc
CFLAGS=-Wall -Wextra -g3
INCLUDES=-I$(ROOT)/emulation/
RM = rm -rf
SRC=reduce-traditionnal.c data_gen.c
BIN=reduce-traditional data-gen reduce-ngi
OBJ=libngi.so libreduce-ngi-userlib.so
all: clean build test
build: $(BIN) $(OBJ)
clean:
$(RM) $(BIN) $(OBJ)
reduce-traditional: reduce-traditional.c
$(CC) $(CFLAGS) $< -o $@ -g3
data-gen: data-gen.c
$(CC) $(CFLAGS) $< -o $@
# Build NGI Emulation lib
libngi.so: $(ROOT)/emulation/ngi.c
@echo 'Building ngi shared library: $@'
$(CC) $(CLFAGS) $(INCLUDES) $< -shared -fpic -o $@
libreduce-ngi-userlib.so: reduce-ngi-userlib.c
@echo 'Building ngi user shared library: $@'
gcc $(CFLAGS) -Wall -Wextra $< -shared -fpic -o $@
reduce-ngi: reduce-ngi.c libngi.so
$(CC) $(CFLAGS) $< -o $@ $(INCLUDES) -L. -l ngi -Wl,-rpath=$(PWD) -ldl
test:
@echo "Data generation"
@./data-gen
@echo "Executing traditional"
@./reduce-traditional
@echo "Executing NGI"
@./reduce-ngi

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@ -5,17 +5,28 @@
#include <stdint.h>
#include <stdbool.h>
#include <float.h>
#include <time.h>
#include <errno.h>
/*
* Generate test data
*/
// generate float number between 0 and 99 with at most 2 decimal
float gen_float(void){
u_int32_t my_int = rand() % 10000;
float my_float = (float) my_int / 100;
return my_float;
}
// generate some data such that we can reduce it later
void prepare_data(int size){
float * data = malloc(size * sizeof(float));
for(int i=0; i < size; i++){
data[i] = (float) i;
data[i] = (float) gen_float();
}
FILE * file = fopen("data.bin", "wb");
@ -25,8 +36,28 @@ void prepare_data(int size){
free(data);
}
// parse generated data
void parse_data(int size){
float data ;
FILE * file = fopen("data.bin", "r");
for(int i=0; i < size; i++){
int res = fread(&data, sizeof(float), 1, file);
if (res != 1){
res = errno;
fprintf(stderr, "fread failed to read the right amount of float: %s\n",strerror(res));
exit(EXIT_FAILURE);
}
fprintf(stdout, "%.2f ", data);
}
fclose(file);
}
int main(){
int size = 100;
int size = 40;
srand(time(NULL));
prepare_data(size);
return 0;
}

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@ -21,6 +21,14 @@ void reduce_data(int size){
printf("Maximum: %f\n", mx);
fclose(file);
}
// read the data and reduce it using the NGI emulation lib
void reduce_data_native(int size){
FILE * file = fopen("data.bin", "rb");
float mx;
ngi_reduce_stub(file, NGI_OP_MAX, NGI_TYPE_FLOAT, & mx, 0, size*sizeof(float));
printf("Maximum (Ngi Native): %f\n", mx);
fclose(file);
}
void reduce_min_func(int8_t * data_i, void * out_buff, size_t off, size_t size){
float * outf = (float*) out_buff;
@ -70,8 +78,9 @@ void reduce_data_func_lib(int size){
int main(){
int size = 100;
int size = 40;
reduce_data(size);
reduce_data_native(size);
reduce_data_func(size);
reduce_data_func_lib(size);
return 0;

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@ -31,7 +31,7 @@ void reduce_data(int size){
int main(){
int size = 100;
int size = 40;
reduce_data(size);
return 0;
}