More advanced benchmark script (v2)

2018-10-24 11:12:52 +02:00 · 2018-10-24 11:12:52 +02:00 · 8c43782886
parent 8bbc7e0b87
commit 8c43782886
1 changed files with 111 additions and 0 deletions
--- a/run_v2.sh
+++ b/run_v2.sh
@ -0,0 +1,111 @@
+#!/bin/bash 
+
+function force_exit {
+    echo "Committing suicide (PID $$)"
+    exit
+}
+
+trap force_exit SIGINT
+
+# Provides a list of good hosts (that contains QDR connection)
+function hosts() {
+    num="$1"
+    #HOST_LIST=( isc17-c04 isc17-c05 isc17-c06 isc17-c18 )
+
+    #HOST_LIST=( isc17-c04 isc17-c05 isc17-c06 isc17-c18 isc17-c01 isc17-c02 isc17-c03 isc17-c07 isc17-c08 isc17-c09 isc17-c11 isc17-c12 isc17-c13 isc17-c14 isc17-c15 isc17-c22 )
+ HOST_LIST=( isc17-c04 isc17-c05 isc17-c06 isc17-c07 isc17-c08 isc17-c09 isc17-c11 isc17-c12 isc17-c13 isc17-c14 isc17-c15 isc17-c18 isc17-c22 isc17-c01 isc17-c02 isc17-c03 )
+
+    hlist=${HOST_LIST[0]}
+    for POS in $(seq 1 $(($num - 1))) ; do 
+        hlist="$hlist,${HOST_LIST[$POS]}"
+    done
+    echo $hlist
+}
+
+export MODULEPATH=/esfs/jtacquaviva/software/modules:$MODULEPATH
+
+module purge
+module load betke/hdf5/1.8.20-ddn
+module load betke/ior/git-ddn
+module list
+
+
+LUSTRE_TESTFILE=""
+
+ITERATIONS=3
+IOR="$(which ior)"
+MPIEXEC="/opt/ddn/mvapich/bin/mpiexec"
+
+
+TYPE_ARR=( "read" )
+API_ARR=( "MPIIO" )
+#NN_ARR=( 4 2 1 8 10 16)
+NN_ARR=( 1 2 4 8 16)
+PPN_ARR=( 8 4 1 6 2)
+T_ARR=( $((10*1024*1024)) $((1*1024*1024)) $((100*1024)) $((16*1024)) )
+
+
+for COUNT in $(seq 1); do
+for TYPE in ${TYPE_ARR[@]}; do
+for NN in ${NN_ARR[@]}; do 
+for T in ${T_ARR[@]}; do 
+for PPN in ${PPN_ARR[@]}; do 
+for API in ${API_ARR[@]}; do 
+
+    BENCHFILE="./output_v2/COUNT:$COUNT#NN:$NN#PPN:$PPN#API:$API#T:$T#TYPE:$TYPE.txt"
+
+	if [ ! -e "${BENCHFILE}" ]; then
+		OUTDIR="$(dirname $BENCHFILE)"
+        if [ ! -d $OUTDIR ]; then
+		mkdir $OUTDIR
+        fi
+        touch $BENCHFILE
+
+        IOR_API_OPTS=""
+
+        IOR_TYPE_OPTS=""
+        if [[ "read" == $TYPE ]]; then
+            IOR_TYPE_OPTS="-r"
+            $MPIEXEC $MPIEXEC_PARAMS /esfs/jtacquaviva/git/ime-evaluation/drop_caches.sh
+            if [[ "POSIX" == $API ]]; then
+                IOR_API_OPTS="-F"
+                LUSTRE_TESTFILE="/esfs/jtacquaviva/indread$NN/file"
+            elif [[ "MPIIO" == $API ]]; then
+                IOR_API_OPTS=""
+                LUSTRE_TESTFILE="/esfs/jtacquaviva/sharedread$NN/file"
+            fi
+
+        elif [[ "write" == $TYPE ]]; then
+            IOR_TYPE_OPTS="-w"
+            LUSTRE_TESTFILE="/esfs/jtacquaviva/ioperf/file_write"
+
+            TESTDIR="$(dirname $LUSTRE_TESTFILE)"
+            if [ -d $TESTDIR ]; then
+            rm -r $TESTDIR
+            fi
+            mkdir -p $TESTDIR 
+            lfs setstripe	-c $((2 * $NN)) $TESTDIR
+            lfs getstripe $TESTDIR | tee -a $BENCHFILE
+        fi
+
+
+        IOR_PARAMS="-i $ITERATIONS -s 1 -t $T -b $((4800 * 1024 * 1024 * 32 / $PPN)) -D $((30)) -a $API $IOR_API_OPTS -e -g -z -k"
+	    ENVVAR="-genv MV2_NUM_HCAS 1 -genv MV2_CPU_BINDING_LEVEL core -genv MV2_CPU_BINDING_POLICY scatter"
+        MPIEXEC_PARAMS=" -ppn $PPN -np $(($NN * $PPN)) $ENVVAR --hosts $(hosts $NN) "
+
+	(
+        set -x
+        $MPIEXEC $MPIEXEC_PARAMS $IOR $IOR_PARAMS -o $LUSTRE_TESTFILE $IOR_TYPE_OPTS | tee -a $BENCHFILE
+        set +x
+	) 2> >(tee -a $BENCHFILE)
+	else
+		echo "skip $(readlink -f $BENCHFILE), already exists"
+	fi
+
+done
+done
+done
+done
+done
+done
+