Analysis and makeDB script fixed
This commit is contained in:
Eugen Betke
parent
ccebfee53e
commit
e3090c5c23
|
|
@ -30,8 +30,8 @@ connection = dbConnect(SQLite(), dbname=file_db)
|
|||
#dbdata = dbGetQuery(connection,'select * from p where tag=="mpio-individual"')
|
||||
#dbdata = dbGetQuery(connection,'select *, (x*y*z) as blocksize from p where count=8')
|
||||
#dbdata = dbGetQuery(connection,'select * from p where count<5')
|
||||
dbdata = dbGetQuery(connection,'select * from p where ppn==1 or ppn=4 or ppn=8')
|
||||
dbdata[,"blocksize"] = dbdata$x * dbdata$y * dbdata$z * 4
|
||||
dbdata = dbGetQuery(connection,'select * from p')
|
||||
dbdata[,"blocksize"] = dbdata$tsize
|
||||
|
||||
|
||||
summary(dbdata)
|
||||
|
|
@ -57,30 +57,26 @@ dims_list = data.frame(h, w, event) # df is a data frame
|
|||
fss = unique(dbdata$fs)
|
||||
for (fs in fss) {
|
||||
data1 = dbdata[fs == dbdata$fs, ]
|
||||
ifaces = unique(data1$iface)
|
||||
apis = unique(data1$api)
|
||||
|
||||
for (iface in ifaces) {
|
||||
data2 = data1[iface == data1$iface, ]
|
||||
print(fs)
|
||||
|
||||
for (api in apis) {
|
||||
data2 = data1[api == data1$api, ]
|
||||
apps = unique(data2$app)
|
||||
|
||||
print(api)
|
||||
|
||||
for (app in apps) {
|
||||
data3 = data2[app == data2$app, ]
|
||||
types = unique(data3$type)
|
||||
|
||||
print(app)
|
||||
|
||||
for (type in types) {
|
||||
data4 = data3[type == data3$type, ]
|
||||
chunkeds = unique(data4$chunked)
|
||||
data = data3[type == data3$type, ]
|
||||
|
||||
for (chunked in chunkeds) {
|
||||
data5 = data4[chunked == data4$chunked, ]
|
||||
filleds = unique(data4$filled)
|
||||
|
||||
for (filled in filleds) {
|
||||
data6 = data5[filled == data5$filled, ]
|
||||
unlimiteds = unique(data5$unlimited)
|
||||
|
||||
for (unlimited in unlimiteds) {
|
||||
data = data6[unlimited == data5$unlimited, ]
|
||||
print(type)
|
||||
|
||||
ggplot(data=data, aes(x=nn, y=write, colour=as.factor(blocksize/1024), group=blocksize), ymin=0) +
|
||||
#ggtitle("Write") +
|
||||
|
|
@ -93,13 +89,13 @@ data = data6[unlimited == data5$unlimited, ]
|
|||
scale_x_continuous(breaks = c(unique(data$nn))) +
|
||||
scale_color_manual(name="Blocksize in KiB: ", values=c('#999999','#E69F00', '#56B4E9', '#000000'), breaks=sort(unique(data$blocksize)/1024)) +
|
||||
#stat_summary(fun.y="median", geom="line", aes(group=factor(blocksize))) +
|
||||
stat_summary(fun.y="max", geom="line", aes(group=factor(blocksize))) +
|
||||
stat_summary(fun.y="mean", geom="line", aes(group=factor(blocksize))) +
|
||||
#geom_boxplot()
|
||||
geom_point()
|
||||
filename_eps = sprintf("%s/performance_%s_%s_%s_%s_CHUNK:%s_FILL:%s_LIM:%s_%s.eps", folder_out, app, fs, iface, type, chunked, filled, unlimited, "write")
|
||||
filename_png = sprintf("%s/performance_%s_%s_%s_%s_CHUNK:%s_FILL:%s_LIM:%s_%s.png", folder_out, app, fs, iface, type, chunked, filled, unlimited, "write")
|
||||
ggsave(filename_png, width = 6, height = 4)
|
||||
ggsave(filename_eps, width = 6, height = 4)
|
||||
filename_eps = sprintf("%s/performance_%s_%s_%s_%s_%s.eps", folder_out, app, fs, api, type, "write")
|
||||
filename_png = sprintf("%s/performance_%s_%s_%s_%s_%s.png", folder_out, app, fs, api, type, "write")
|
||||
ggsave(filename_png, width = 6, height = 10)
|
||||
ggsave(filename_eps, width = 6, height = 10)
|
||||
system(sprintf("epstopdf %s", filename_eps))
|
||||
system(sprintf("rm %s", filename_eps))
|
||||
|
||||
|
|
@ -114,30 +110,14 @@ data = data6[unlimited == data5$unlimited, ]
|
|||
scale_x_continuous(breaks = c(unique(data$nn))) +
|
||||
scale_color_manual(name="Blocksize in KiB: ", values=c('#999999','#E69F00', '#56B4E9', '#000000'), breaks=sort(unique(data$blocksize)/1024)) +
|
||||
#stat_summary(fun.y="median", geom="line", aes(group=factor(blocksize))) +
|
||||
stat_summary(fun.y="max", geom="line", aes(group=factor(blocksize))) +
|
||||
stat_summary(fun.y="mean", geom="line", aes(group=factor(blocksize))) +
|
||||
#geom_boxplot()
|
||||
geom_point()
|
||||
filename_eps = sprintf("%s/performance_%s_%s_%s_%s_CHUNK:%s_FILL:%s_LIM:%s_%s.eps", folder_out, app, fs, iface, type, chunked, filled, unlimited, "read")
|
||||
filename_png = sprintf("%s/performance_%s_%s_%s_%s_CHUNK:%s_FILL:%s_LIM:%s_%s.png", folder_out, app, fs, iface, type, chunked, filled, unlimited, "read")
|
||||
ggsave(filename_png, width = 6, height = 4)
|
||||
ggsave(filename_eps, width = 6, height = 4)
|
||||
filename_eps = sprintf("%s/performance_%s_%s_%s_%s_%s.eps", folder_out, app, fs, api, type, "read")
|
||||
filename_png = sprintf("%s/performance_%s_%s_%s_%s_%s.png", folder_out, app, fs, api, type, "read")
|
||||
ggsave(filename_png, width = 6, height = 10)
|
||||
ggsave(filename_eps, width = 6, height = 10)
|
||||
system(sprintf("epstopdf %s", filename_eps))
|
||||
system(sprintf("rm %s", filename_eps))
|
||||
|
||||
|
||||
#ggplot(data=data, aes(x=blocksize, y=read, colour=app, group=blocksize)) +
|
||||
# ggtitle("Read") +
|
||||
# facet_grid(ppn ~ nn, labeller = labeller(nn = as_labeller(nn_lab), ppn = as_labeller(ppn_lab))) +
|
||||
# xlab("Blocksize in KiB") +
|
||||
# ylab("Performance in MiB/s") +
|
||||
# theme(axis.text.x=element_text(angle=90, hjust=0.95, vjust=0.5)) +
|
||||
# scale_y_log10() +
|
||||
# scale_x_log10(breaks = breaks, labels=breaks/1024) +
|
||||
# geom_boxplot()
|
||||
##geom_line() +
|
||||
##geom_point()
|
||||
#filename_eps = sprintf("%s/performance_%s_%s_%s_%s_%s.eps", folder_out, app, fs, iface, type, "read")
|
||||
#ggsave(filename_eps, width = 8, height = 6)
|
||||
##system(sprintf("epstopdf %s", filename_eps))
|
||||
|
||||
}}}}}}}
|
||||
}}}}
|
||||
|
|
|
|||
7
mkdb.py
7
mkdb.py
|
|
@ -33,6 +33,9 @@ def parse(filename, conn):
|
|||
metadata["ppn"] = int(m.group(3))
|
||||
metadata["api"] = m.group(4)
|
||||
metadata["tsize"] = m.group(5)
|
||||
metadata["fs"] = "lustre"
|
||||
metadata["app"] = "ior-default"
|
||||
metadata["type"] = "random"
|
||||
|
||||
else:
|
||||
print('couldn\'t parse', os.path.basename(filename))
|
||||
|
|
@ -75,7 +78,7 @@ def parse(filename, conn):
|
|||
|
||||
|
||||
for iteration,entry in data.items():
|
||||
if len(entry) == 19:
|
||||
if len(entry) == 22:
|
||||
print("Success")
|
||||
columns = ", ".join(entry.keys())
|
||||
placeholders = ':' + ', :'.join(entry.keys())
|
||||
|
|
@ -103,6 +106,8 @@ try:
|
|||
nn int, \
|
||||
ppn int, \
|
||||
api text, \
|
||||
fs text, \
|
||||
type text, \
|
||||
tsize float, \
|
||||
fsize float, \
|
||||
fsize_ctl txt, \
|
||||
|
|
|
|||
Loading…
Reference in New Issue